LSDIS Lab

Satya Sanket Sahoo
LSDIS Lab > People > Satya Sanket Sahoo >Publications

Satya Sanket
Sahoo
Home

Courses

Research

Publications

Resume

Links

Contact Info

I have moved. This page is being redirected to my new page.

Journal Papers

  1. S.S. Sahoo, C. Thomas, A. Sheth, C. Henson, W.S. York, "GLYDE-an expressive XML standard for the representation of glycan structure".Carbohydr Res. 2005 Dec 30;340(18):2802-7. Epub 2005 Oct 20. PMID: 16242678
  2. J.A. Atwood 3rd, S.S. Sahoo, G. Alvarez-Manilla, D.B. Weatherly, K. Kolli, R. Orlando, W.S. York, "Simple modification of a protein database for mass spectral identification of N-linked glycopeptides." Rapid Commun Mass Spectrom. 2005;19(21):3002-6. PMID: 16196021

Conference/Symposium Publications

  1. S.S. Sahoo, K. Zeng, O. Bodenreider, A.P. Sheth, "From 'glycosyltransferase' to 'congenital muscular dystrophy': Integrating knowledge from NCBI Entrez Gene and the Gene Ontology"(pdf), Medinfo 2007, Brisbane, Australia, 20-24 August, 2007.
  2. S.S. Sahoo, C. Thomas, A. Sheth, W.S. York and S. Tartir " Knowledge Modeling and its application in Life Sciences: A Tale of two Ontologies "(pdf), 15th International World Wide Web Conference, (WWW2006) Edinburgh, Scotland, May 23 - May 26, 2006 (Acceptance Rate: 11%)
  3. S.S. Sahoo, A.P. Sheth, W.S. York, J.A. Miller, Semantic Web Services for N-glycosylation Process (Abstract), International Symposium on Web Services for Computational Biology and Bioinformatics, VBI, Blacksburg, VA, May 26-27, 2005.
  4. B. Aleman-Meza, C. Halaschek-Wiener, S.S. Sahoo, A. Sheth, I.B. Arpinar, " Template Based Semantic Similarity for Security Applications," Extended Abstract, (conference version), Proceedings of the IEEE Intl. Conference on Intelligence and Security Informatics (ISI-2005), May 19-20, 2005

Workshop Publications

  1. S.S. Sahoo, O. Bodenreider, K. Zeng, A.P. Sheth,"An experiment in integrating large biomedical knowledge resources with RDF: Application to associating genotype and phenotype information"(pdf),Proceedings of the WWW2007 Workshop on Health Care and Life Sciences Data Integration for the Semantic Web, May 8-12, 2007, Banff, Alberta, Canada.
  2. S.S. Sahoo, O. Bodenreider, K. Zeng, A.P. Sheth, "Adapting resources to the Semantic Web: Experience with Entrez Gene". Proceedings of the Workshop for W3C Semantic Web Health Care & Life Sciences at ISWC 2006
  3. W.S. York, A. Sheth, K. Kochut, J. Miller, C. Thomas, K. Gomadam, S.S. Sahoo, M. Nagarajan, X. Yi, Semantic Integration of Glycomics Data and Information, Human Disease Glycomics/Proteome Initiative 1st Workshop 2004: Functional Glycomics in Disease, Osaka, Japan.
  4. A. Sheth, W. York, C. Thomas, M. Nagarajan, J. A. Miller, K. Kochut, S.S. Sahoo, X. Yi, Semantic Web technology in support of Bioinformatics for Glycan Expression, W3C Workshop on Semantic Web for Life Sciences, 27-28 October 2004, Cambridge, Massachusetts USA.

Book Chapters

  1. S.S. Sahoo, A. Sheth, B. Hunter, W.S. York, "SemBOWSER - adding Semantics to biological Web services registry" in Semantic Web: Revolutionizing Knowledge Discovery in the Life Sciences, Edited by Christopher J. O. Baker and Kei-Hoi Cheung. Springer, 2007 (in print)
  2. S.S. Sahoo, A. Sheth, "Bioinformatics applications of Web Services, Web Processes and role of Semantics" in Semantic Web Processes and Their Applications. J. Cardoso, A. Sheth, Editors. Springer, 2006, pp. 305-322.

Demonstration Papers/Posters

  1. S.S. Sahoo, B. Hunter, A. Sheth, W.S. York, "Semantic Biological Web Services Registry", Annual Symposium on Computational and Systems Biology, Athens, GA November 11, 2005
  2. G. Alvarez-Manilla, J. Atwood. III, S.S. Sahoo, Y. Guo, N.L. Warren, W.S. York, R. Orlando, and M. Pierce 2005. Tools for glycoproteomic analysis: size-exclusion chromatography facilitates identification of tryptic glycopeptides with N-linked glycosylation sites. (Annual Conference of the Society for Glycobiology, November 9-12.) Glycobiology 15:1208

Technical Reports

  1. Satya S. Sahoo, Christopher Thomas, Amit P. Sheth, William S. York, GlycO and ProPreO: A case study of two deep domain life sciences ontologies LSDIS lab Technical Report, UGA, September 2005
  2. Boanerges Aleman-Meza, Christian Halaschek-Wiener, Satya Sanket Sahoo, Amit Sheth, I. Budak Arpinar, Template Based Semantic Similarity for Security Applications, Technical Report, LSDIS Lab, Computer Science Department, University of Georgia, January 2005

Satya Sanket Sahoo
Last modified: Oct 15, 2006
The content and opinions expressed on this Web page do not necessarily reflect the views of nor are they endorsed by the University of Georgia or the University System of Georgia.